Michelle A. Hughes & Peter
A. Williams (2000). Cloning and characterization
of the pnb genes for 4-nitrobenzoate catabolism in Pseudomonas
putida TW3. J. Bacteriol.
182: 3136-3141
ABSTRACT
Pseudomonas putida strain TW3 is
able to metabolize 4-nitrotoluene via 4-nitrobenzoate (4NBen) and 3,4-dihydroxybenzoic
acid (protocatechuate) to central metabolites. We have cloned, sequenced
and characterized a 6 kbp fragment of TW3 DNA which contains five genes,
two of which encode the enzymes involved in the catabolism of 4-nitrobenzoate
to protocatechuate. In order, they encode a 4NBen reductase (PnbA) which
is responsible for catalyzing the direct reduction of 4NBen to 4-hydroxylaminobenzoate
with the oxidation of 2 moles of NADH per mole of 4NBen, a reductase-like
enzyme (Orf1) which appears to have no function in the pathway, a regulator
protein (PnbR) of the LysR-family, a 4-hydroxylaminobenzoate lyase (PnbB)
which catalyzes the conversion of 4-hydroxylaminobenzoate to protocatechuate
and ammonium, and a second lyase-like enzyme (Orf2) which is closely associated
with pnbB but appears to have no function in the pathway. The central
pnbR
gene is transcribed in the opposite direction to the other four genes.
These genes complete the characterization of the whole pathway of 4-nitrotoluene
catabolism to the ring cleavage substrate protocatechuate in P. putida
strain TW3.